[lsst-dm-stack-users] Another MAF build fail

[Lynne Jones]

I’m going to kick this one straight along to the experts at lsst-dm-stack-users, as astrometry.net is a tricky part of the installation. 

However, Chuck, I’ll let you in on a little secret I’m not supposed to publicize though — if you do 
‘eups distrib install sims_maf -t sims’ 
instead of 
'eups distrib install lsst_sims -t sims'
you will skip a good chunk of the installation not directly relevant to MAF and in particular you will skip astrometry.net. 

We’re trying to get people to install the entire sims package, which has wider dependencies than MAF alone, because we anticipate that you will want the rest of the sims packages sooner rather than later (and we’d rather not say, “well, go back and add to you install”) … but in this case, with the limited time before the workshop, I’d say go ahead and try the shorter installation if you don’t hear back from lsst-dm-stack-users shortly. 

Lynne


On Aug 7, 2014, at 12:04 PM, Chuck Claver <cclaver at noao.edu> wrote:

> All,
> 
> In my attempt to install MAF asrtometry.net failed to build due to a missing "pam.h"
> 
> Chuck
> 
> Here is my command line:
> 
> -> eups distrib install lsst_sims -t sims
> 
> Here is my screen dump:
>  [  1/61 ]  cfitsio 3310+2                                             done.
>  [  2/61 ]  doxygen 1.8.2+2 (already installed)                        done.
>  [  3/61 ]  eigen 3.1.1+2                                              done.
>  [  4/61 ]  fftw 3.3.2+2                                               done.
>  [  5/61 ]  freetds 2014.04.07                                         done.
>  [  6/61 ]  gsl 1.15+2                                                 done.
>  [  7/61 ]  minuit2 5.22.00+2                                          done.
>  [  8/61 ]  mysqlclient 5.1.65+3                                       done.
>  [  9/61 ]  pyephem 3.7.5.1                                            done.
>  [ 10/61 ]  python 0.0.1 (already installed)                           done.
>  [ 11/61 ]  sims_dustmaps 2014.04.17                                   done.
>  [ 12/61 ]  sims_sed_library 2014.04.23                                done.
>  [ 13/61 ]  swig 2.0.12                                                done.
>  [ 14/61 ]  throughputs master-ga6e2efc0c9                             done.
>  [ 15/61 ]  xpa 2.1.14+2                                               done.
>  [ 16/61 ]  astrometry_net 0.30+3 ...
> 
> ***** error: from /Users/chuckclaver/src/LSST/EupsBuildDir/DarwinX86/astrometry_net-0.30+3/build.log:
> ./keywords.h:84:44: note: expanded from macro 'Flatten'
> # define Flatten          __attribute__ (( flatten))
>                                           ^
> 36 warnings generated.
> rm -f libanfiles.a
> ar rc libanfiles.a  index.o codekd.o starkd.o rdlist.o xylist.o starxy.o an-catalog.o qidxfile.o quadfile.o scamp-catalog.o hd.o
> ranlib libanfiles.a
> cc -shared -dynamic -dynamiclib -fPIC -o _sip.so sip-utils.o sip.o starutil.o mathutil.o sip_qfits.o fitsioutils.o ioutils.o bl.o os-features.o an-endian.o errors.o log.o ../qfits-an/lib/libqfits.a
> cc -shared -dynamic -dynamiclib -fPIC -o _healpix.so healpix-utils.o healpix.o permutedsort.o starutil.o mathutil.o errors.o bl.o log.o os-features.o
> cc  -std=gnu89  -std=gnu89 -g -Wall -ffinite-math-only -fno-signaling-nans -pthread -mtune=generic -O3 -fomit-frame-pointer -DNDEBUG -fPIC -Winline -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -I/opt/local/include/cairo -I/opt/local/include/glib-2.0 -I/opt/local/lib/glib-2.0/include -I/opt/local/include -I/opt/local/include/pixman-1 -I/opt/local/include -I/opt/local/include/freetype2 -I/opt/local/include -I/opt/local/include/freetype2 -I/opt/local/include/libpng16 -I/opt/local/include   -I../gsl-an -I../qfits-an/include -I../libkd -I.   -c -o an-fitstopnm.o an-fitstopnm.c
> cc  -g -Wall -ffinite-math-only -fno-signaling-nans -pthread -mtune=generic -O3 -fomit-frame-pointer -DNDEBUG -fPIC -Winline -lm  an-fitstopnm.o libanutils.a ../qfits-an/lib/libqfits.a   -o an-fitstopnm
> clang: warning: argument unused during compilation: '-pthread'
> cc  -std=gnu89  -std=gnu89 -g -Wall -ffinite-math-only -fno-signaling-nans -pthread -mtune=generic -O3 -fomit-frame-pointer -DNDEBUG -fPIC -Winline -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -I/opt/local/include/cairo -I/opt/local/include/glib-2.0 -I/opt/local/lib/glib-2.0/include -I/opt/local/include -I/opt/local/include/pixman-1 -I/opt/local/include -I/opt/local/include/freetype2 -I/opt/local/include -I/opt/local/include/freetype2 -I/opt/local/include/libpng16 -I/opt/local/include   -I../gsl-an -I../qfits-an/include -I../libkd -I.   -c -o an-pnmtofits.o an-pnmtofits.c
> an-pnmtofits.c:25:10: fatal error: 'pam.h' file not found
> #include "pam.h"
>         ^
> 1 error generated.
> make[1]: *** [an-pnmtofits.o] Error 1
> make: *** [all] Error 2
> + exit -4
> eups distrib: Failed to build astrometry_net-0.30+3.eupspkg: Command:
>    source /Users/chuckclaver/src/LSST/eups/bin/setups.sh; export EUPS_PATH=/Users/chuckclaver/src/LSST; (/Users/chuckclaver/src/LSST/EupsBuildDir/DarwinX86/astrometry_net-0.30+3/build.sh) >> /Users/chuckclaver/src/LSST/EupsBuildDir/DarwinX86/astrometry_net-0.30+3/build.log 2>&1 4>/Users/chuckclaver/src/LSST/EupsBuildDir/DarwinX86/astrometry_net-0.30+3/build.msg 
> exited with code 252
> 
>