[lsst-dm-stack-users] boost install failure

Robyn Allsman robyn.allsman at gmail.com
Mon Jun 2 20:21:16 PDT 2014


Perhaps Dick could include a reference to it in the Install guide; perhaps
Mario/designate could look into an LSST installer mod.  Make a Jira Issue
directed to someone in DevOps to look into this.


On Mon, Jun 2, 2014 at 7:39 PM, Lynne Jones <ljones.uw at gmail.com> wrote:

> I passed along the page I referenced below, and it seems to have fixed his
> problem. Is this something that should be detected by the LSST installer in
> the future?
> On Jun 2, 2014 6:09 PM, "Dustin Lang" <dstndstn at gmail.com> wrote:
>
>>
>> You've probably already noticed this, but the actual error (many
>> errors, actually) appears to be:
>>
>> clang-darwin.compile.c++
>> bin.v2/libs/python/build/clang-darwin-4.2.1/release/threading-multi/numeric.o
>> In file included from libs/python/src/numeric.cpp:6:
>> In file included from ./boost/python/numeric.hpp:8:
>> In file included from ./boost/python/detail/prefix.hpp:13:
>> ./boost/python/detail/wrap_python.hpp:50:11: fatal error: 'pyconfig.h'
>> file not found
>> # include <pyconfig.h>
>>           ^
>> 1 error generated.
>>
>>
>> It looks as though it's including the directory that *should* contain that
>> header file in it:
>> -I"/Users/akim/canopy/include/python2.7"
>>
>> Does that directory actually contain pyconfig.h ?
>>
>> cheers,
>> --dstn
>>
>>
>> On Mon, 2 Jun 2014, Lynne Jones wrote:
>>
>> > Build log file:
>> >
>> >
>> > Begin forwarded message:
>> >
>> >
>> >
>> >
>> >
>> > On Jun 2, 2014, at 4:13 PM, Lynne Jones <ljones.uw at gmail.com> wrote:
>> >
>> > > Hmm. I wonder if this is his problem:
>> > >
>> > >
>> https://github.com/GalSim-developers/GalSim/wiki/Installation-FAQ#in-mac-osx-what-can-i-do-if-im-having-trouble-getting-boostpython-to-work-with-enthought-canopy-python
>> > >
>> > >
>> > >
>> > > On Jun 2, 2014, at 4:00 PM, Lynne Jones <ljones.uw at gmail.com> wrote:
>> > >
>> > >> Hi all (probably Mario?)
>> > >>
>> > >> I have an install problem from a user (Alex Kim) trying to install
>> the sims packages via ‘eups distrib install lsst_sims -t sims’.
>> > >> He’s having it crash at the boost install stage.
>> > >>
>> > >> Here’s the info on his system:
>> > >>
>> > >> clang --version
>> > >> Apple LLVM version 5.1 (clang-503.0.38) (based on LLVM 3.4svn)
>> > >> Target: x86_64-apple-darwin13.2.0
>> > >> Thread model: posix
>> > >>
>> > >> OS X 10.9.3
>> > >>
>> > >> not using anaconda but enthought’s Canopy, which I have been using
>> for many years.
>> > >>
>> > >>
>> > >>
>> > >> And here is the error message:
>> > >>
>> > >>   [ 10/31 ]  boost 1.55.0.1 ...
>> > >>
>> > >> ***** error: from
>> /Users/akim/Work/lsst/installation/root/EupsBuildDir/DarwinX86/boost-1.55.0.1/build.log:
>> > >> common.copy stage/lib/libboost_timer.a
>> > >> clang-darwin.compile.c++
>> bin.v2/libs/wave/build/clang-darwin-4.2.1/release/link-static/threading-multi/instantiate_cpp_grammar.o
>> > >> clang-darwin.compile.c++
>> bin.v2/libs/wave/build/clang-darwin-4.2.1/release/link-static/threading-multi/instantiate_cpp_exprgrammar.o
>> > >> clang-darwin.compile.c++
>> bin.v2/libs/wave/build/clang-darwin-4.2.1/release/link-static/threading-multi/instantiate_defined_grammar.o
>> > >> clang-darwin.compile.c++
>> bin.v2/libs/wave/build/clang-darwin-4.2.1/release/link-static/threading-multi/instantiate_cpp_literalgrs.o
>> > >> clang-darwin.compile.c++
>> bin.v2/libs/wave/build/clang-darwin-4.2.1/release/link-static/threading-multi/instantiate_re2c_lexer.o
>> > >> clang-darwin.compile.c++
>> bin.v2/libs/wave/build/clang-darwin-4.2.1/release/link-static/threading-multi/instantiate_predef_macros.o
>> > >> clang-darwin.compile.c++
>> bin.v2/libs/wave/build/clang-darwin-4.2.1/release/link-static/threading-multi/token_ids.o
>> > >> clang-darwin.compile.c++
>> bin.v2/libs/wave/build/clang-darwin-4.2.1/release/link-static/threading-multi/wave_config_constant.o
>> > >> common.mkdir
>> bin.v2/libs/wave/build/clang-darwin-4.2.1/release/link-static/threading-multi/cpplexer
>> > >> common.mkdir
>> bin.v2/libs/wave/build/clang-darwin-4.2.1/release/link-static/threading-multi/cpplexer/re2clex
>> > >> clang-darwin.compile.c++
>> bin.v2/libs/wave/build/clang-darwin-4.2.1/release/link-static/threading-multi/cpplexer/re2clex/aq.o
>> > >> clang-darwin.compile.c++
>> bin.v2/libs/wave/build/clang-darwin-4.2.1/release/link-static/threading-multi/instantiate_re2c_lexer_str.o
>> > >> clang-darwin.compile.c++
>> bin.v2/libs/wave/build/clang-darwin-4.2.1/release/link-static/threading-multi/cpplexer/re2clex/cpp_re.o
>> > >> clang-darwin.archive
>> bin.v2/libs/wave/build/clang-darwin-4.2.1/release/link-static/threading-multi/libboost_wave.a
>> > >> common.copy stage/lib/libboost_wave.a
>> > >> ...failed updating 56 targets...
>> > >> ...skipped 5 targets...
>> > >> ...updated 973 targets...
>> > >> + exit -4
>> > >> eups distrib: Failed to build boost-1.55.0.1.eupspkg: Command:
>> > >>    source
>> /Users/akim/Work/lsst/installation/root/eups/bin/setups.sh; export
>> EUPS_PATH=/Users/akim/Work/lsst/installation/root;
>> (/Users/akim/Work/lsst/installation/root/EupsBuildDir/DarwinX86/boost-1.55.0.1/build.sh)
>> >>
>> /Users/akim/Work/lsst/installation/root/EupsBuildDir/DarwinX86/boost-1.55.0.1/build.log
>> 2>&1
>> 4>/Users/akim/Work/lsst/installation/root/EupsBuildDir/DarwinX86/boost-1.55.0.1/build.msg
>> > >> exited with code 252
>> > >>
>> > >>
>> > >>
>> > >> Lynne
>> > >
>> >
>> >
>
>
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