[lsst-dm-stack-users] adding scipy to DMstack installation

Heather Kelly heather625 at gmail.com
Tue Apr 2 14:43:46 PDT 2013


On Tue, Apr 2, 2013 at 4:46 PM, Paul Price <price at astro.princeton.edu>wrote:

> On Apr 2, 2013, at 4:33 PM, Heather Kelly wrote:
>
> I actually didn't have a site/manifest.remap associated with the RHEL6-64
> installation that we did from source..I had tried introducing one but it
> didn't seem to make any difference.  Your recipe worked out much better.
>
>
>
> The manifest.remap file is only applied by "eups distrib", so once a
> product has been installed (and the dependency recorded), the remapping
> won't help.  You could do "eups distrib install -F" (force) to rebuild with
> the changed dependency, but no need now.
>
>
> I'm now trying to do a similar thing for our RHEL5-64 installation which
> was from the binaries you guys provided back in December...initially doing
> the eups distrib install --nolocks scipy failed, since it couldn't find
> blas or lapack - I did manage to point at our local installation of those.
>  Now it's failing since the link path is likely using the location of the
> python used when the binaries were created.  Is there a sensible way to add
> scipy in this case?  We don't have gcc44 for RHEL5-64 here so the binary
> installation seemed the best bet in this case.
>
>
> I could point you to a package server that might allow you to build gcc
> 4.6.3 in the eups stack.  Let me know if you want to go that route.
>
> P.
>

Hi Paul,

That might be handy to know - building gcc 4.6.3 in the stack.  We have
many rhel5-64 boxes available in our batch queues and would like to
continue using them for processing some of the sensor test analysis data.

Thanks,
heather
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